2023 IEEE International Symposium on Workload Characterization (IISWC’23)October 1-3, 2023, Ghent, Belgium DOI: 10.1109/IISWC59245.2023.00029PDF Version Progress in High-Performance Computing in general, and High-Performance Graph Processing in particular, is highly dependent on the availability of publicly-accessible, relevant, and realistic data sets. In this paper, we announce publication of MS-BioGraphs, a new […]
real-world graphs
21 posts
DOI: 10.48550/arXiv.2308.16744 PDF VersionarXiv Link Progress in High-Performance Computing in general, and High-Performance Graph Processing in particular, is highly dependent on the availability of publicly-accessible, relevant, and realistic data sets. To ensure continuation of this progress, we (i) investigate and optimize the process of generating large sequence similarity graphs as […]
Name MS-BioGraphs – MS URL https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MS Download Link https://doi.org/10.21227/gmd9-1534 Script for Downloading All Files https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-on-IEEE-DataPort/ Validating and Sample Code https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-Validation/ Graph Explanation Vertices represent proteins and each edge represents the sequence similarity between its two endpoints Edge Weighted Yes Directed No Number of Vertices 1,757,323,526 Number of Edges 2,488,069,027,875 Maximum […]
Name MS-BioGraphs – MSA500 URL https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA500 Download Link https://doi.org/10.21227/gmd9-1534 Script for Downloading All Files https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-on-IEEE-DataPort/ Validating and Sample Code https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-Validation/ Graph Explanation Vertices represent proteins and each edge represents the sequence similarity between its two endpoints Edge Weighted Yes Directed Yes Number of Vertices 1,757,323,526 Number of Edges 1,244,904,754,157 Maximum […]
Name MS-BioGraphs – MS200 URL https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MS200 Download Link https://doi.org/10.21227/gmd9-1534 Script for Downloading All Files https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-on-IEEE-DataPort/ Validating and Sample Code https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-Validation/ Graph Explanation Vertices represent proteins and each edge represents the sequence similarity between its two endpoints Edge Weighted Yes Directed No Number of Vertices 1,414,493,449 Number of Edges 502,930,788,612 Maximum […]
Name MS-BioGraphs – MSA200 URL https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA200 Download Link https://doi.org/10.21227/gmd9-1534 Script for Downloading All Files https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-on-IEEE-DataPort/ Validating and Sample Code https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-Validation/ Graph Explanation Vertices represent proteins and each edge represents the sequence similarity between its two endpoints Edge Weighted Yes Directed Yes Number of Vertices 1,757,323,526 Number of Edges 500,444,322,597 Maximum […]
Name MS-BioGraphs – MS50 URL https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MS50 Download Link https://doi.org/10.21227/gmd9-1534 Script for Downloading All Files https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-on-IEEE-DataPort/ Validating and Sample Code https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-Validation/ Graph Explanation Vertices represent proteins and each edge represents the sequence similarity between its two endpoints Edge Weighted Yes Directed No Number of Vertices 585,603,088 Number of Edges 124,783,559,600 Maximum […]
Name MS-BioGraphs – MSA50 URL https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA50 Download Link https://doi.org/10.21227/gmd9-1534 Script for Downloading All Files https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-on-IEEE-DataPort/ Validating and Sample Code https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-Validation/ Graph Explanation Vertices represent proteins and each edge represents the sequence similarity between its two endpoints Edge Weighted Yes Directed Yes Number of Vertices 1,757,323,526 Number of Edges 125,312,536,732 Maximum […]
Name MS-BioGraphs – MSA10 URL https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA10 Download Link https://doi.org/10.21227/gmd9-1534 Script for Downloading All Files https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-on-IEEE-DataPort/ Validating and Sample Code https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-Validation/ Graph Explanation Vertices represent proteins and each edge represents the sequence similarity between its two endpoints Edge Weighted Yes Directed Yes Number of Vertices 1,757,323,526 Number of Edges 25,236,632,682 Maximum […]
Name MS-BioGraphs – MS1 URL https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MS1 Download Link https://doi.org/10.21227/gmd9-1534 Script for Downloading All Files https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-on-IEEE-DataPort/ Validating and Sample Code https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-Validation/ Graph Explanation Vertices represent proteins and each edge represents the sequence similarity between its two endpoints Edge Weighted Yes Directed No Number of Vertices 43,144,218 Number of Edges 2,660,495,200 Maximum […]